STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN44968.1Signal transduction histidine kinase. (482 aa)    
Predicted Functional Partners:
AFN46026.1
Response regulator receiver domain protein.
 
   
 0.880
AFN44939.1
RNA polymerase sigma-70 factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
   
 0.662
whiB-2
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
  
     0.617
AFN45803.1
Anti-sigma factor.
       0.596
AFN47300.1
BMC domain protein.
 
     0.536
AFN46692.1
Hypothetical protein.
  
     0.531
AFN45269.1
Putative ethanolamine utilization protein, EutP; Belongs to the EutP/PduV family.
 
   
 0.524
AFN47680.1
Hypothetical protein.
  
    0.488
whiB
Transcription factor WhiB domain protein; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA.
 
   
 0.444
AFN46202.1
Hypothetical protein.
 
     0.403
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.