STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mcemethylmalonyl-CoA epimerase. (152 aa)    
Predicted Functional Partners:
AFN46812.1
methylmalonyl-CoA mutase.
 
  
 0.992
AFN47672.1
Carboxyl transferase domain protein.
 
 
 0.980
mutA
methylmalonyl-CoA mutase, small subunit.
 
  
 0.971
pycA
Pyruvate carboxylase subunit A.
  
 
 0.951
AFN46078.1
methylmalonyl-CoA carboxyltransferase 5S subunit.
    
  0.904
AFN45411.1
methylmalonyl-CoA carboxyltransferase 12S subunit.
 
 
 0.895
AFN45329.1
LAO/AO transport system ATPase.
 
   
 0.819
AFN47463.1
KR domain protein.
  
  
 0.651
AFN45666.1
Bacterial membrane flanked domain protein.
 
     0.609
AFN47674.1
methylmalonyl-CoA carboxyltransferase 1.3S subunit.
  
 
  0.560
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.