STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN45479.1Periplasmic solute-binding family protein; Belongs to the bacterial solute-binding protein 9 family. (326 aa)    
Predicted Functional Partners:
AFN47789.1
ABC transporter, ATP-binding protein.
 
 
 0.996
AFN45642.1
ABC 3 transport family protein.
 
 
 0.994
mntA
Manganese transport system ATP-binding protein MntA.
 
  
 0.898
AFN46073.1
Iron chelate uptake ABC transporter, FeCT family, permease protein.
  
 0.892
AFN45374.1
ABC 3 transport family protein.
 
  
 0.891
AFN45034.1
Ferric uptake regulator family protein; Belongs to the Fur family.
 
  
 0.849
rpmB_2
Ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
  
 0.618
AFN45688.1
Antibiotic biosynthesis monooxygenase.
       0.600
AFN45050.1
Hypothetical protein.
  
  
 0.593
rpsN
Ribosomal protein S14p/S29e; Binds 16S rRNA, required for the assembly of 30S particles and may also be responsible for determining the conformation of the 16S rRNA at the A site.
  
  
 0.539
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.