Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN46249.1ABC transporter, permease protein. (298 aa)    
Predicted Functional Partners:
AFN47584.1
ABC transporter, solute-binding protein.
 
 0.998
AFN44931.1
ABC transporter, permease protein.
 
 0.974
AFN44964.1
ABC transporter, permease protein.
 
 0.902
AFN45759.1
TOBE domain protein; Belongs to the ABC transporter superfamily.
 
 
 0.902
AFN46959.1
ABC transporter, permease protein.
 
 0.900
AFN47695.1
ABC transporter, permease protein.
 
 0.898
AFN47229.1
ABC transporter, permease protein.
 
 0.898
AFN47127.1
ABC transporter, permease protein.
   0.879
AFN46501.1
TOBE domain protein; Belongs to the ABC transporter superfamily.
 
 
 0.866
AFN47790.1
ABC transporter, permease protein.
 
 0.843
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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