STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46607.1ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein. (520 aa)    
Predicted Functional Partners:
mtrA
DNA-binding response regulator MtrA.
 0.997
AFN46300.1
Lipoprotein LpqB beta-propeller domain protein.
  
 0.984
mprA_1
Response regulator MprA.
 
 0.855
regX_1
Sensory transduction protein RegX3.
 
 0.844
irlR
Transcriptional activator protein Irlr.
 
 0.837
resD
Transcriptional regulatory protein ResD.
 
 0.830
regX_3
Sensory transduction protein RegX3.
 
 0.811
regX_2
Sensory transduction protein RegX3.
 
 0.808
mprA_2
Response regulator MprA.
 
 0.794
AFN46417.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
 
 
 0.766
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.