Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
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[Homology]
Score
AFN46300.1Lipoprotein LpqB beta-propeller domain protein. (566 aa)    
Predicted Functional Partners:
AFN46607.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
 
  
 0.957
mtrA
DNA-binding response regulator MtrA.
     
 0.851
AFN45079.1
Phosphoribosyl transferase domain protein.
       0.741
AFN45459.1
Type II secretion system F domain protein.
  
     0.656
AFN47476.1
Hypothetical protein.
 
     0.644
AFN46259.1
Hypothetical protein.
  
     0.597
AFN46681.1
Putative tRNA adenosine deaminase-associated protein.
  
     0.579
raiA
Ribosomal subunit interface protein; Required for dimerization of active 70S ribosomes into 100S ribosomes in stationary phase; 100S ribosomes are translationally inactive and sometimes present during exponential growth.
  
    0.560
AFN47026.1
Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
     0.552
AFN45199.1
Hypothetical protein.
  
     0.550
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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