STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45079.1Phosphoribosyl transferase domain protein. (214 aa)    
Predicted Functional Partners:
AFN45267.1
Putative DNA internalization competence protein ComEC/Rec2-like protein.
 
  
 0.890
nagA
N-acetylglucosamine-6-phosphate deacetylase.
 
    0.821
AFN46061.1
Prephenate dehydrogenase.
  
  
 0.808
xerC
Site-specific recombinase, phage integrase family; Site-specific tyrosine recombinase, which acts by catalyzing the cutting and rejoining of the recombining DNA molecules. The XerC- XerD complex is essential to convert dimers of the bacterial chromosome into monomers to permit their segregation at cell division. It also contributes to the segregational stability of plasmids.
   
    0.784
AFN46300.1
Lipoprotein LpqB beta-propeller domain protein.
       0.775
AFN46611.1
Thi4 domain protein.
  
    0.772
apt
Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis.
   
    0.765
AFN46607.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
 
    0.762
mtrA
DNA-binding response regulator MtrA.
  
    0.760
AFN47322.1
Putative DNA protecting protein DprA.
 
 
 0.742
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.