STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46186.1Hypothetical protein. (192 aa)    
Predicted Functional Partners:
AFN45551.1
Type I phosphodiesterase/nucleotide pyrophosphatase domain protein.
 
     0.895
tdk
Thymidine kinase.
       0.860
AFN47316.1
Glycosyltransferase, group 1 family protein.
       0.773
AFN46888.1
DNA gyrase/topoisomerase IV, A subunit.
 
     0.681
AFN44914.1
Hypothetical protein.
  
     0.652
AFN47308.1
Hypothetical protein.
  
     0.638
AFN46884.1
Hypothetical protein.
       0.623
AFN45897.1
Transcriptional regulator, IclR family, C-terminal domain protein.
  
     0.618
AFN47416.1
Hypothetical protein.
  
     0.605
AFN46897.1
Hypothetical protein.
  
     0.595
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.