Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFN44961.1 | AFN45325.1 | HMPREF9154_1539 | HMPREF9154_1540 | TrkA N-terminal domain protein. | TrkA N-terminal domain protein. | 0.916 |
| AFN44961.1 | AFN45639.1 | HMPREF9154_1539 | HMPREF9154_2767 | TrkA N-terminal domain protein. | Potassium/proton antiporter. | 0.404 |
| AFN44961.1 | AFN46122.1 | HMPREF9154_1539 | HMPREF9154_1541 | TrkA N-terminal domain protein. | Putative membrane protein. | 0.868 |
| AFN44961.1 | AFN46301.1 | HMPREF9154_1539 | HMPREF9154_1805 | TrkA N-terminal domain protein. | Porphobilinogen deaminase, dipyromethane cofactor-binding domain protein. | 0.419 |
| AFN44961.1 | AFN47101.1 | HMPREF9154_1539 | HMPREF9154_1542 | TrkA N-terminal domain protein. | TRAM domain protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.676 |
| AFN44961.1 | AFN47460.1 | HMPREF9154_1539 | HMPREF9154_1538 | TrkA N-terminal domain protein. | Hypothetical protein. | 0.658 |
| AFN44961.1 | acnA | HMPREF9154_1539 | HMPREF9154_1543 | TrkA N-terminal domain protein. | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.577 |
| AFN44961.1 | hemC | HMPREF9154_1539 | HMPREF9154_1799 | TrkA N-terminal domain protein. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.419 |
| AFN44961.1 | moaE | HMPREF9154_1539 | HMPREF9154_0823 | TrkA N-terminal domain protein. | Molybdopterin converting factor, subunit 2. | 0.527 |
| AFN44961.1 | nifJ | HMPREF9154_1539 | HMPREF9154_0751 | TrkA N-terminal domain protein. | Pyruvate synthase. | 0.534 |
| AFN45325.1 | AFN44961.1 | HMPREF9154_1540 | HMPREF9154_1539 | TrkA N-terminal domain protein. | TrkA N-terminal domain protein. | 0.916 |
| AFN45325.1 | AFN46122.1 | HMPREF9154_1540 | HMPREF9154_1541 | TrkA N-terminal domain protein. | Putative membrane protein. | 0.850 |
| AFN45325.1 | AFN46301.1 | HMPREF9154_1540 | HMPREF9154_1805 | TrkA N-terminal domain protein. | Porphobilinogen deaminase, dipyromethane cofactor-binding domain protein. | 0.419 |
| AFN45325.1 | AFN47101.1 | HMPREF9154_1540 | HMPREF9154_1542 | TrkA N-terminal domain protein. | TRAM domain protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. | 0.676 |
| AFN45325.1 | AFN47460.1 | HMPREF9154_1540 | HMPREF9154_1538 | TrkA N-terminal domain protein. | Hypothetical protein. | 0.642 |
| AFN45325.1 | acnA | HMPREF9154_1540 | HMPREF9154_1543 | TrkA N-terminal domain protein. | Aconitate hydratase 1; Catalyzes the isomerization of citrate to isocitrate via cis- aconitate. | 0.577 |
| AFN45325.1 | hemC | HMPREF9154_1540 | HMPREF9154_1799 | TrkA N-terminal domain protein. | Hydroxymethylbilane synthase; Tetrapolymerization of the monopyrrole PBG into the hydroxymethylbilane pre-uroporphyrinogen in several discrete steps. Belongs to the HMBS family. | 0.419 |
| AFN45325.1 | moaE | HMPREF9154_1540 | HMPREF9154_0823 | TrkA N-terminal domain protein. | Molybdopterin converting factor, subunit 2. | 0.527 |
| AFN45325.1 | nifJ | HMPREF9154_1540 | HMPREF9154_0751 | TrkA N-terminal domain protein. | Pyruvate synthase. | 0.534 |
| AFN45639.1 | AFN44961.1 | HMPREF9154_2767 | HMPREF9154_1539 | Potassium/proton antiporter. | TrkA N-terminal domain protein. | 0.404 |
page 1 of 3