STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45306.1Succinate-semialdehyde dehydrogenase [NAD(P)+]. (492 aa)    
Predicted Functional Partners:
sdhA_1
Succinate dehydrogenase flavoprotein subunit.
   
 0.924
sdhA_2
Succinate dehydrogenase flavoprotein subunit.
   
 0.924
AFN47784.1
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit.
   
 
 0.912
AFN45075.1
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit.
   
 
 0.912
AFN45156.1
Succinate CoA transferase.
  
 
 0.908
sdhC_1
Succinate dehydrogenase cytochrome B subunit, b558 family.
   
 
  0.901
sdhC_2
Succinate dehydrogenase cytochrome B subunit, b558 family.
   
 
  0.901
gltA
Citrate (Si)-synthase; Belongs to the citrate synthase family.
  
 0.889
AFN47373.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
   
 0.872
fumC
Fumarate hydratase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
   
 0.840
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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