STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45358.1L,D-transpeptidase catalytic domain protein. (408 aa)    
Predicted Functional Partners:
lnt
Apolipoprotein N-acyltransferase; Catalyzes the phospholipid dependent N-acylation of the N- terminal cysteine of apolipoprotein, the last step in lipoprotein maturation; Belongs to the CN hydrolase family. Apolipoprotein N- acyltransferase subfamily.
     
 0.693
AFN45170.1
Methionine synthase, vitamin-B12 independent.
  
     0.645
AFN46137.1
Na+/H+ antiporter subunit.
       0.623
AFN46559.1
Multiple resistance and pH regulation protein, F, MrpF/PhaF family.
       0.623
AFN47128.1
Na+/H+ ion antiporter subunit.
       0.623
AFN45509.1
NADH-ubiquinone/plastoquinone complex I subunit.
       0.623
AFN46564.1
Putative K(+)/H(+) antiporter subunit C.
       0.623
AFN46843.1
Putative monovalent cation/H+ antiporter subunit A.
       0.623
AFN45630.1
FxsA cytoplasmic membrane protein.
       0.565
AFN47470.1
Glycosyltransferase, group 2 family protein.
       0.565
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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