Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| AFN45111.1 | gmk | HMPREF9154_1988 | HMPREF9154_1620 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.911 |
| AFN45111.1 | guaA | HMPREF9154_1988 | HMPREF9154_2130 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | GMP synthase (glutamine-hydrolyzing), C-terminal domain protein; Catalyzes the synthesis of GMP from XMP. | 0.648 |
| AFN45111.1 | pyk | HMPREF9154_1988 | HMPREF9154_1910 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | Pyruvate kinase; Belongs to the pyruvate kinase family. | 0.908 |
| AFN45111.1 | relA | HMPREF9154_1988 | HMPREF9154_1645 | Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent; Catalyzes the reduction of ribonucleotides to deoxyribonucleotides. May function to provide a pool of deoxyribonucleotide precursors for DNA repair during oxygen limitation and/or for immediate growth after restoration of oxygen. | GTP diphosphokinase; In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. | 0.901 |
| AFN45147.1 | AFN45375.1 | HMPREF9154_0296 | HMPREF9154_1755 | 5'-nucleotidase. | 5'-nucleotidase, C-terminal domain protein; Belongs to the 5'-nucleotidase family. | 0.900 |
| AFN45147.1 | apt | HMPREF9154_0296 | HMPREF9154_1647 | 5'-nucleotidase. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.900 |
| AFN45147.1 | gmk | HMPREF9154_0296 | HMPREF9154_1620 | 5'-nucleotidase. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.900 |
| AFN45147.1 | guaA | HMPREF9154_0296 | HMPREF9154_2130 | 5'-nucleotidase. | GMP synthase (glutamine-hydrolyzing), C-terminal domain protein; Catalyzes the synthesis of GMP from XMP. | 0.900 |
| AFN45147.1 | hpt | HMPREF9154_0296 | HMPREF9154_0416 | 5'-nucleotidase. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.900 |
| AFN45147.1 | pyrF | HMPREF9154_0296 | HMPREF9154_1622 | 5'-nucleotidase. | Orotidine 5'-phosphate decarboxylase. | 0.900 |
| AFN45375.1 | AFN45147.1 | HMPREF9154_1755 | HMPREF9154_0296 | 5'-nucleotidase, C-terminal domain protein; Belongs to the 5'-nucleotidase family. | 5'-nucleotidase. | 0.900 |
| AFN45375.1 | apt | HMPREF9154_1755 | HMPREF9154_1647 | 5'-nucleotidase, C-terminal domain protein; Belongs to the 5'-nucleotidase family. | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 0.936 |
| AFN45375.1 | gmk | HMPREF9154_1755 | HMPREF9154_1620 | 5'-nucleotidase, C-terminal domain protein; Belongs to the 5'-nucleotidase family. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.902 |
| AFN45375.1 | guaA | HMPREF9154_1755 | HMPREF9154_2130 | 5'-nucleotidase, C-terminal domain protein; Belongs to the 5'-nucleotidase family. | GMP synthase (glutamine-hydrolyzing), C-terminal domain protein; Catalyzes the synthesis of GMP from XMP. | 0.914 |
| AFN45375.1 | hpt | HMPREF9154_1755 | HMPREF9154_0416 | 5'-nucleotidase, C-terminal domain protein; Belongs to the 5'-nucleotidase family. | Hypoxanthine phosphoribosyltransferase; Belongs to the purine/pyrimidine phosphoribosyltransferase family. | 0.902 |
| AFN45375.1 | pyrF | HMPREF9154_1755 | HMPREF9154_1622 | 5'-nucleotidase, C-terminal domain protein; Belongs to the 5'-nucleotidase family. | Orotidine 5'-phosphate decarboxylase. | 0.902 |
| apt | AFN45147.1 | HMPREF9154_1647 | HMPREF9154_0296 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 5'-nucleotidase. | 0.900 |
| apt | AFN45375.1 | HMPREF9154_1647 | HMPREF9154_1755 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | 5'-nucleotidase, C-terminal domain protein; Belongs to the 5'-nucleotidase family. | 0.936 |
| apt | gmk | HMPREF9154_1647 | HMPREF9154_1620 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.974 |
| apt | guaA | HMPREF9154_1647 | HMPREF9154_2130 | Adenine phosphoribosyltransferase; Catalyzes a salvage reaction resulting in the formation of AMP, that is energically less costly than de novo synthesis. | GMP synthase (glutamine-hydrolyzing), C-terminal domain protein; Catalyzes the synthesis of GMP from XMP. | 0.998 |
page 1 of 4