STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46555.1Hypothetical protein. (229 aa)    
Predicted Functional Partners:
AFN45811.1
TIGR00245 family protein.
  
    0.721
AFN47826.1
Ser/Thr phosphatase domain protein.
       0.622
AFN46735.1
Hypothetical protein.
       0.609
AFN45885.1
Peptidoglycan-binding domain protein.
  
    0.589
AFN45701.1
Hypothetical protein.
 
     0.578
glyS
glycine--tRNA ligase, beta subunit.
  
    0.530
AFN46711.1
Cupin domain protein.
   
   0.500
AFN47054.1
Methyltransferase domain protein.
  
    0.462
AFN45057.1
Transcriptional regulator, ArsR family.
  
    0.457
AFN46008.1
Transporter, major facilitator family protein.
       0.454
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.