STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46711.1Cupin domain protein. (117 aa)    
Predicted Functional Partners:
AFN47054.1
Methyltransferase domain protein.
 
     0.858
AFN45057.1
Transcriptional regulator, ArsR family.
  
    0.742
AFN46008.1
Transporter, major facilitator family protein.
  
    0.733
AFN47826.1
Ser/Thr phosphatase domain protein.
       0.551
AFN45913.1
GroES-like protein.
 
     0.544
AFN46735.1
Hypothetical protein.
       0.536
AFN47463.1
KR domain protein.
  
  
 0.523
AFN46555.1
Hypothetical protein.
   
   0.500
AFN46335.1
Methyltransferase domain protein.
 
     0.488
AFN45811.1
TIGR00245 family protein.
  
    0.481
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.