STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN47066.1ABC transporter, ATP-binding protein. (292 aa)    
Predicted Functional Partners:
AFN45660.1
Putative membrane protein.
  
 0.959
AFN46123.1
ABC transporter, ATP-binding protein.
 
    
0.913
AFN45878.1
ABC transporter, ATP-binding protein.
 
     
0.839
AFN46762.1
ABC transporter, ATP-binding protein.
 
    
0.797
AFN45759.1
TOBE domain protein; Belongs to the ABC transporter superfamily.
 
     
0.756
AFN46442.1
ABC transporter, permease protein, DrrB family.
 
  
 0.737
AFN46764.1
ABC transporter, ATP-binding protein.
 
     
0.693
AFN45640.1
Transcriptional regulator, TetR family.
 
     0.595
AFN45977.1
ABC transporter, permease protein, DrrB family.
     0.496
AFN44970.1
ABC transporter, permease protein, DrrB family.
  
 0.488
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.