STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45220.1Beta-phosphoglucomutase family hydrolase. (237 aa)    
Predicted Functional Partners:
AFN46023.1
Glycosyl hydrolase family 65 central catalytic domain protein.
  
 0.997
AFN45871.1
SNF2 family N-terminal domain protein.
   
   0.782
AFN47339.1
formamidopyrimidine-DNA glycosylase H2TH domain protein; Belongs to the FPG family.
       0.768
AFN45500.1
TIGR03943 family protein.
  
    0.584
AFN44966.1
Putative permease.
       0.578
AFN46874.1
Hypothetical protein.
       0.578
ligA
DNA ligase (NAD+); DNA ligase that catalyzes the formation of phosphodiester linkages between 5'-phosphoryl and 3'-hydroxyl groups in double- stranded DNA using NAD as a coenzyme and as the energy source for the reaction. It is essential for DNA replication and repair of damaged DNA; Belongs to the NAD-dependent DNA ligase family. LigA subfamily.
       0.537
pepN
Membrane alanyl aminopeptidase.
       0.415
AFN46207.1
PTS family porter, EIIC.
  
  
 0.409
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.