STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN47581.1ABC transporter, solute-binding protein. (439 aa)    
Predicted Functional Partners:
AFN47790.1
ABC transporter, permease protein.
  
 
 0.810
AFN45759.1
TOBE domain protein; Belongs to the ABC transporter superfamily.
  
 
 0.670
AFN45453.1
ABC transporter, ATP-binding protein; Belongs to the ABC transporter superfamily.
  
 
 0.670
AFN46501.1
TOBE domain protein; Belongs to the ABC transporter superfamily.
  
 
 0.670
AFN44931.1
ABC transporter, permease protein.
 
 
 0.635
AFN46887.1
ABC transporter, permease protein.
  
 
 0.630
AFN47745.1
ABC transporter, permease protein.
  
 
 0.630
AFN46381.1
Putative maltose transport system permease protein MalF.
 
   0.607
AFN45296.1
ABC transporter, permease protein.
  
 
 0.567
AFN44964.1
ABC transporter, permease protein.
  
 
 0.566
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
Server load: low (20%) [HD]