STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46753.1Sortase family protein. (236 aa)    
Predicted Functional Partners:
AFN45920.1
Phospholipase, patatin family.
 
     0.771
AFN45277.1
Hypothetical protein.
  
     0.730
AFN47105.1
LysM domain protein.
  
     0.710
AFN46864.1
Hypothetical protein.
  
     0.635
AFN47224.1
Putative nitrite reductase, copper-dependent.
  
     0.602
AFN46681.1
Putative tRNA adenosine deaminase-associated protein.
  
     0.602
AFN47787.1
TIGR03083 family protein.
  
     0.578
AFN44914.1
Hypothetical protein.
  
     0.570
AFN46718.1
Putative membrane protein.
  
     0.561
AFN47037.1
Glycosyltransferase, group 2 family protein.
  
     0.544
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.