STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46146.1Hypothetical protein. (416 aa)    
Predicted Functional Partners:
AFN47371.1
Transglutaminase-like protein.
    0.970
AFN45356.1
ATPase, AAA family.
  
 0.857
mraZ
Protein MraZ; Belongs to the MraZ family.
       0.645
AFN47670.1
Hypothetical protein.
       0.568
AFN47040.1
Peptidase, M16 family; Overlaps another CDS with the same product name.
       0.556
AFN45491.1
Peptidase, M16 family; Overlaps another CDS with the same product name.
       0.556
mraW
S-adenosyl-methyltransferase MraW; Specifically methylates the N4 position of cytidine in position 1402 (C1402) of 16S rRNA.
  
    0.543
AFN47423.1
Putative membrane protein.
 
     0.517
AFN46171.1
Hypothetical protein.
       0.498
AFN45666.1
Bacterial membrane flanked domain protein.
  
     0.484
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.