STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN46850.1Putative CRISPR-associated protein. (770 aa)    
Predicted Functional Partners:
AFN46496.1
Hypothetical protein.
 
 
 0.955
AFN47235.1
CRISPR-associated RAMP protein.
 
     0.831
AFN45261.1
Efflux ABC transporter, permease protein.
  
     0.772
AFN47002.1
Hypothetical protein.
  
     0.769
AFN46935.1
Transcriptional regulator, TetR family.
  
     0.750
AFN47003.1
Glycosyl hydrolase family 16.
  
     0.673
AFN45153.1
Hypothetical protein.
  
     0.670
AFN45933.1
Putative membrane protein.
  
     0.664
AFN45116.1
FR47-like protein.
  
     0.654
AFN46563.1
Hypothetical protein.
  
     0.638
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.