Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN46259.1Hypothetical protein. (124 aa)    
Predicted Functional Partners:
AFN46525.1
Pseudouridylate synthase; Belongs to the pseudouridine synthase RsuA family.
       0.853
soj_1
Sporulation initiation inhibitor protein Soj.
       0.852
scpB
Segregation and condensation protein B; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves.
       0.840
AFN45614.1
ScpA/B protein; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpB that pull DNA away from mid-cell into both cell halves.
       0.840
cbiX_2
Sirohydrochlorin cobaltochelatase.
  
     0.756
AFN46291.1
Peptidyl-prolyl cis-trans isomerase, FKBP-type.
       0.706
AFN45255.1
Hypothetical protein.
  
     0.676
AFN45919.1
Hypothetical protein.
  
     0.674
AFN46155.1
TQXA domain protein.
  
     0.669
AFN47033.1
TQXA domain protein.
  
     0.664
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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