STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45050.1Hypothetical protein. (108 aa)    
Predicted Functional Partners:
mntA
Manganese transport system ATP-binding protein MntA.
  
 
 0.826
AFN47789.1
ABC transporter, ATP-binding protein.
  
 
 0.818
czrA
HTH-type transcriptional repressor CzrA.
       0.774
AFN46237.1
Hypothetical protein.
  
     0.633
AFN46504.1
Periplasmic solute-binding family protein; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.617
AFN45479.1
Periplasmic solute-binding family protein; Belongs to the bacterial solute-binding protein 9 family.
  
  
 0.617
AFN46919.1
Putative membrane protein.
  
    0.551
tyrS
tyrosine--tRNA ligase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily.
       0.548
AFN46614.1
YcaO-like protein.
  
     0.511
AFN46322.1
Aminoglycoside/hydroxyurea antibiotic resistance kinase.
  
     0.502
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.