AFN46213.1 protein (Pseudopropionibacterium propionicum)

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Knowledge-based Evidence

from curated databases

textmining

Assay-based Predictions

experimentally determined

co-expression

Genomic Predictions

gene neighborhood

gene co-occurrence

gene fusions

Your Input:

Neighborhood

Gene Fusion

Co-occurrence

Co-expression

Experiments

Databases

Textmining

[Homology]

Score

AFN46213.1

Putative iron(III) dicitrate transport system permease protein FecD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily. (330 aa)

Predicted Functional Partners:

fhuC_2

0.991

fepG

0.977

AFN45975.1

0.974

AFN47232.1

0.970

fecE_1

0.965

fecE_2

0.965

cbrD

0.964

AFN46410.1

0.923

AFN45178.1

0.912

AFN46936.1

0.904

Your Current Organism:

Pseudopropionibacterium propionicum

NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of proteins in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFN45178.1	AFN45975.1	HMPREF9154_0779	HMPREF9154_2069	Periplasmic-binding protein.	Putative ferrienterobactin-binding periplasmic protein.	0.931
AFN45178.1	AFN46213.1	HMPREF9154_0779	HMPREF9154_2068	Periplasmic-binding protein.	Putative iron(III) dicitrate transport system permease protein FecD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.912
AFN45178.1	AFN46410.1	HMPREF9154_0779	HMPREF9154_0777	Periplasmic-binding protein.	Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.955
AFN45178.1	AFN46936.1	HMPREF9154_0779	HMPREF9154_3159	Periplasmic-binding protein.	Periplasmic-binding protein.	0.971
AFN45178.1	AFN47232.1	HMPREF9154_0779	HMPREF9154_2067	Periplasmic-binding protein.	Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.876
AFN45178.1	cbrD	HMPREF9154_0779	HMPREF9154_3156	Periplasmic-binding protein.	Achromobactin ABC transporter, ATP-binding protein CbrD.	0.970
AFN45178.1	fecE_1	HMPREF9154_0779	HMPREF9154_0780	Periplasmic-binding protein.	iron(III) dicitrate ABC transporter, ATP-binding protein FecE.	0.990
AFN45178.1	fecE_2	HMPREF9154_0779	HMPREF9154_2138	Periplasmic-binding protein.	iron(III) dicitrate ABC transporter, ATP-binding protein FecE.	0.970
AFN45178.1	fepG	HMPREF9154_0779	HMPREF9154_2139	Periplasmic-binding protein.	Ferric enterobactin transport system permease protein FepG; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.910
AFN45178.1	fhuC_2	HMPREF9154_0779	HMPREF9154_2066	Periplasmic-binding protein.	Ferrichrome ABC transporter, ATP-binding protein FhuC.	0.969
AFN45975.1	AFN45178.1	HMPREF9154_2069	HMPREF9154_0779	Putative ferrienterobactin-binding periplasmic protein.	Periplasmic-binding protein.	0.931
AFN45975.1	AFN46213.1	HMPREF9154_2069	HMPREF9154_2068	Putative ferrienterobactin-binding periplasmic protein.	Putative iron(III) dicitrate transport system permease protein FecD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.974
AFN45975.1	AFN46410.1	HMPREF9154_2069	HMPREF9154_0777	Putative ferrienterobactin-binding periplasmic protein.	Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.938
AFN45975.1	AFN46936.1	HMPREF9154_2069	HMPREF9154_3159	Putative ferrienterobactin-binding periplasmic protein.	Periplasmic-binding protein.	0.931
AFN45975.1	AFN47232.1	HMPREF9154_2069	HMPREF9154_2067	Putative ferrienterobactin-binding periplasmic protein.	Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.986
AFN45975.1	cbrD	HMPREF9154_2069	HMPREF9154_3156	Putative ferrienterobactin-binding periplasmic protein.	Achromobactin ABC transporter, ATP-binding protein CbrD.	0.959
AFN45975.1	fecE_1	HMPREF9154_2069	HMPREF9154_0780	Putative ferrienterobactin-binding periplasmic protein.	iron(III) dicitrate ABC transporter, ATP-binding protein FecE.	0.958
AFN45975.1	fecE_2	HMPREF9154_2069	HMPREF9154_2138	Putative ferrienterobactin-binding periplasmic protein.	iron(III) dicitrate ABC transporter, ATP-binding protein FecE.	0.959
AFN45975.1	fepG	HMPREF9154_2069	HMPREF9154_2139	Putative ferrienterobactin-binding periplasmic protein.	Ferric enterobactin transport system permease protein FepG; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.	0.956
AFN45975.1	fhuC_2	HMPREF9154_2069	HMPREF9154_2066	Putative ferrienterobactin-binding periplasmic protein.	Ferrichrome ABC transporter, ATP-binding protein FhuC.	0.990

page 1 of 5

Server load: low (38%) [HD]

Permalink

Network

Neighborhood

Experiments

Fusion

Databases

Co-occurrence

Textmining

Co-expression

© STRING Consortium 2026

Credits

Access

Info

About