STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45856.1Iron-sulfur cluster assembly accessory protein; Belongs to the HesB/IscA family. (123 aa)    
Predicted Functional Partners:
AFN46909.1
Aminotransferase, class V.
 
  
 0.841
AFN47146.1
SUF system FeS assembly protein, NifU family.
  
  
 0.830
AFN45731.1
Glycerate kinase domain protein.
       0.803
sucA
Oxoglutarate dehydrogenase (succinyl-transferring), E1 component.
  
   
 0.700
AFN46788.1
Glycine cleavage T-protein C-terminal barrel domain protein; Belongs to the GcvT family.
 
 
 0.690
AFN46294.1
Hypothetical protein.
  
 
 0.651
AFN47647.1
NifU-like protein.
  
 
 0.651
sufC
FeS assembly ATPase SufC.
  
 
 0.589
sufB
FeS assembly protein SufB.
  
 
 0.588
AFN46647.1
Putative FeS assembly protein SufD.
  
 
 0.588
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.