STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN47765.1PspA/IM30 family protein. (267 aa)    
Predicted Functional Partners:
AFN45718.1
PspC domain protein.
 
 
 0.983
AFN45114.1
Hypothetical protein.
 
     0.969
AFN46384.1
PspC domain protein.
  
 
 0.900
AFN47185.1
Hypothetical protein.
 
  
 0.835
AFN47416.1
Hypothetical protein.
  
     0.767
AFN47706.1
Hypothetical protein.
 
  
 0.731
AFN46379.1
Hypothetical protein.
 
     0.720
AFN47308.1
Hypothetical protein.
  
     0.706
AFN45644.1
Hypothetical protein.
  
    0.678
AFN45731.1
Glycerate kinase domain protein.
 
     0.649
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.