STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46271.1Transcriptional regulator, TetR family. (183 aa)    
Predicted Functional Partners:
AFN47226.1
Hypothetical protein.
   
    0.663
cobB-2
Transcriptional regulator, Sir2 family; Belongs to the sirtuin family. Class III subfamily.
   
    0.608
AFN46616.1
2'-5' RNA ligase; Hydrolyzes RNA 2',3'-cyclic phosphodiester to an RNA 2'- phosphomonoester; Belongs to the 2H phosphoesterase superfamily. ThpR family.
       0.608
AFN46048.1
Transcriptional regulator, Sir2 family.
   
    0.608
AFN47533.1
Transcriptional regulator, ArsR family.
  
    0.584
AFN46200.1
Iron dependent repressor, metal binding/dimerization domain protein.
   
    0.567
AFN44970.1
ABC transporter, permease protein, DrrB family.
       0.519
drrA
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
       0.519
AFN47150.1
UbiC transcription regulator-associated domain protein.
   
    0.483
AFN46373.1
UbiC transcription regulator-associated domain protein.
   
    0.483
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.