STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN46419.1Putative oligopeptide ABC transporter, permease protein AppB. (506 aa)    
Predicted Functional Partners:
AFN45965.1
Putative oligopeptide ABC transporter, permease protein AppC.
 
 0.994
AFN46387.1
ABC transporter, substrate-binding protein, family 5.
 
 0.989
AFN45141.1
Oligopeptide/dipeptide transporter, C-terminal domain protein; Belongs to the ABC transporter superfamily.
 
 
 0.965
AFN45648.1
Putative D,D-dipeptide transport system permease protein DdpC.
 
 
 0.853
AFN45389.1
Putative nickel transport system permease protein NikC.
 
 0.851
AFN47545.1
ABC transporter, permease protein.
 
 
 0.851
AFN45725.1
ABC transporter, permease protein.
 
 
 0.849
AFN45733.1
ABC transporter, permease protein.
 
 
 0.844
AFN44975.1
ABC transporter, ATP-binding protein.
 
 
 0.813
AFN46513.1
ABC transporter, ATP-binding protein.
 
 
 0.770
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
Server load: low (16%) [HD]