STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46387.1ABC transporter, substrate-binding protein, family 5. (608 aa)    
Predicted Functional Partners:
AFN46419.1
Putative oligopeptide ABC transporter, permease protein AppB.
 
 
 0.925
AFN45965.1
Putative oligopeptide ABC transporter, permease protein AppC.
 
 
 0.903
AFN45141.1
Oligopeptide/dipeptide transporter, C-terminal domain protein; Belongs to the ABC transporter superfamily.
 
  
 0.824
nifJ
Pyruvate synthase.
  
    0.731
AFN44927.1
Peptidase, S9A/B/C family, catalytic domain protein; Overlaps another CDS with the same product name.
  
     0.659
AFN45831.1
ABC-2 type transporter, NodJ family.
  
  
 0.587
AFN46057.1
Peptidase, S9A/B/C family, catalytic domain protein.
 
     0.563
AFN46381.1
Putative maltose transport system permease protein MalF.
  
 
  0.543
AFN44975.1
ABC transporter, ATP-binding protein.
  
  
 0.520
tsaD
Putative glycoprotease GCP; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in tRNAs that read codons beginning with adenine. Is involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37, together with TsaE and TsaB. TsaD likely plays a direct catalytic role in this reaction; Belongs to the KAE1 / TsaD family.
       0.499
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.