Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
AFN46436.1Putative ferrichrome ABC transporter, ATP-binding protein FhuC. (270 aa)    
Predicted Functional Partners:
AFN47223.1
Periplasmic-binding protein.
 
   0.965
AFN46000.1
Iron chelate uptake ABC transporter, FeCT family, permease protein; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
   0.964
AFN44975.1
ABC transporter, ATP-binding protein.
 
    
0.816
AFN46896.1
Putative lipoprotein.
       0.661
AFN46213.1
Putative iron(III) dicitrate transport system permease protein FecD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.616
fepD_2
Ferric enterobactin transport system permease protein FepD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.576
fhuB
Iron(3+)-hydroxamate import system permease protein FhuB; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.556
fepD_1
Ferric enterobactin transport system permease protein FepD; Belongs to the binding-protein-dependent transport system permease family. FecCD subfamily.
 
 
 0.551
trmB
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
       0.547
truA
tRNA pseudouridine synthase A; Formation of pseudouridine at positions 38, 39 and 40 in the anticodon stem and loop of transfer RNAs.
       0.547
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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