STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN46726.1Hypothetical protein. (175 aa)    
Predicted Functional Partners:
rsr
60 kDa SS-A/Ro ribonucleoprotein-like protein.
  
     0.583
AFN46458.1
Hypothetical protein.
       0.572
AFN47012.1
Suppressor of fused protein.
  
     0.542
rplT
Ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
  
     0.514
AFN47010.1
Oxidoreductase NAD-binding domain protein.
  
     0.481
AFN45525.1
Thioesterase domain protein.
  
     0.468
AFN46683.1
Thioesterase domain protein.
  
     0.454
AFN46510.1
Hypothetical protein.
  
     0.438
AFN45894.1
Serpin; Belongs to the serpin family.
  
     0.412
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.