STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
eccCa_2Type VII secretion protein EccCa. (1320 aa)    
Predicted Functional Partners:
eccD
Type VII secretion integral membrane protein EccD.
 
 
 0.970
AFN45655.1
Putative type VII secretion integral membrane protein EccD.
 
 
 0.932
AFN45091.1
Hypothetical protein; Belongs to the WXG100 family.
  
 
 0.900
AFN47420.1
Putative type VII secretion integral membrane protein EccD.
 
 
 0.866
eccB
Type VII secretion protein EccB.
 
 
 0.861
AFN46543.1
Hypothetical protein.
      0.856
AFN45196.1
Hypothetical protein.
  
    0.789
AFN46782.1
FHA domain protein.
       0.774
AFN46450.1
Fibronectin type III domain protein.
  
   0.534
AFN47262.1
Hypothetical protein.
       0.531
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.