STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46971.1Putative lipoprotein ABC transporter, ATP-binding protein. (287 aa)    
Predicted Functional Partners:
AFN46336.1
Efflux ABC transporter, permease protein.
 
   0.969
AFN46486.1
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein.
 
    0.807
AFN45867.1
Efflux ABC transporter, permease protein.
 
    0.638
AFN45261.1
Efflux ABC transporter, permease protein.
 
   0.586
AFN45643.1
Efflux ABC transporter, permease protein.
  
   0.565
AFN45104.1
Efflux ABC transporter, permease protein.
  
 
 0.564
regX_3
Sensory transduction protein RegX3.
       0.529
AFN45182.1
Putative iron(III) dicitrate ABC transporter, ATP-binding protein FecE.
  
    0.511
AFN46346.1
Efflux ABC transporter, permease protein.
  
   0.509
AFN45008.1
Efflux ABC transporter, permease protein.
  
   0.509
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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