Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AFN45082.1 | AFN45987.1 | HMPREF9154_2281 | HMPREF9154_1611 | Efflux ABC transporter, permease protein. | Cna protein B-type domain protein. | 0.522 |
AFN45082.1 | AFN47017.1 | HMPREF9154_2281 | HMPREF9154_2279 | Efflux ABC transporter, permease protein. | Histidine kinase. | 0.619 |
AFN45082.1 | AFN47085.1 | HMPREF9154_2281 | HMPREF9154_2441 | Efflux ABC transporter, permease protein. | Putative dimethyladenosine transferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | 0.428 |
AFN45082.1 | AFN47160.1 | HMPREF9154_2281 | HMPREF9154_2278 | Efflux ABC transporter, permease protein. | Transcriptional regulator, LuxR family. | 0.574 |
AFN45082.1 | AFN47786.1 | HMPREF9154_2281 | HMPREF9154_1452 | Efflux ABC transporter, permease protein. | ABC transporter, ATP-binding protein. | 0.410 |
AFN45082.1 | AFN47812.1 | HMPREF9154_2281 | HMPREF9154_2280 | Efflux ABC transporter, permease protein. | ABC transporter, ATP-binding protein. | 0.918 |
AFN45987.1 | AFN45082.1 | HMPREF9154_1611 | HMPREF9154_2281 | Cna protein B-type domain protein. | Efflux ABC transporter, permease protein. | 0.522 |
AFN47017.1 | AFN45082.1 | HMPREF9154_2279 | HMPREF9154_2281 | Histidine kinase. | Efflux ABC transporter, permease protein. | 0.619 |
AFN47017.1 | AFN47160.1 | HMPREF9154_2279 | HMPREF9154_2278 | Histidine kinase. | Transcriptional regulator, LuxR family. | 0.960 |
AFN47085.1 | AFN45082.1 | HMPREF9154_2441 | HMPREF9154_2281 | Putative dimethyladenosine transferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. | Efflux ABC transporter, permease protein. | 0.428 |
AFN47160.1 | AFN45082.1 | HMPREF9154_2278 | HMPREF9154_2281 | Transcriptional regulator, LuxR family. | Efflux ABC transporter, permease protein. | 0.574 |
AFN47160.1 | AFN47017.1 | HMPREF9154_2278 | HMPREF9154_2279 | Transcriptional regulator, LuxR family. | Histidine kinase. | 0.960 |
AFN47786.1 | AFN45082.1 | HMPREF9154_1452 | HMPREF9154_2281 | ABC transporter, ATP-binding protein. | Efflux ABC transporter, permease protein. | 0.410 |
AFN47812.1 | AFN45082.1 | HMPREF9154_2280 | HMPREF9154_2281 | ABC transporter, ATP-binding protein. | Efflux ABC transporter, permease protein. | 0.918 |