STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45890.1ABC transporter, ATP-binding protein. (246 aa)    
Predicted Functional Partners:
AFN45261.1
Efflux ABC transporter, permease protein.
 
   0.942
AFN44975.1
ABC transporter, ATP-binding protein.
 
    
0.803
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
    0.800
AFN46768.1
Efflux ABC transporter, permease protein.
 
  
 0.735
AFN46629.1
ABC transporter, ATP-binding protein.
 
    
0.671
AFN45998.1
ABC transporter, ATP-binding protein.
 
    
0.641
AFN46336.1
Efflux ABC transporter, permease protein.
 
   0.603
AFN46617.1
ABC transporter transmembrane region.
 
    
0.594
AFN45643.1
Efflux ABC transporter, permease protein.
  
   0.565
AFN45104.1
Efflux ABC transporter, permease protein.
  
 
 0.564
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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