STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN45000.1AMP-binding enzyme. (595 aa)    
Predicted Functional Partners:
AFN45090.1
AMP-binding enzyme.
  
  
 
0.920
pycA
Pyruvate carboxylase subunit A.
  
 
 0.819
AFN47672.1
Carboxyl transferase domain protein.
    
  0.805
AFN47463.1
KR domain protein.
  
 0.795
AFN46464.1
Acyltransferase.
    
 0.668
AFN47683.1
malonyl-CoA synthase family protein.
 
 
 0.664
AFN46007.1
Nonribosomal peptide synthase.
  
 
 0.569
AFN47381.1
Branched-chain amino acid ABC transporter, permease protein; Belongs to the binding-protein-dependent transport system permease family.
  
    0.514
AFN47334.1
Hypothetical protein.
       0.467
AFN47470.1
Glycosyltransferase, group 2 family protein.
  
  
 0.429
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.