AFN46694.1 protein (Pseudopropionibacterium propionicum)

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AFN46694.1

Bacterial transcription activator, effector-binding domain protein. (272 aa)

Predicted Functional Partners:

rpoB

0.916

rpoA

0.877

rpoZ

0.876

rpoC

0.876

rpoD

0.849

AFN45529.1

0.849

gph

0.550

AFN45487.1

0.535

AFN46336.1

0.526

AFN47334.1

0.518

Your Current Organism:

Pseudopropionibacterium propionicum

NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
AFN45487.1	AFN46694.1	HMPREF9154_0122	HMPREF9154_2371	Transcriptional regulator, TetR family.	Bacterial transcription activator, effector-binding domain protein.	0.535
AFN45529.1	AFN46694.1	HMPREF9154_1947	HMPREF9154_2371	Sigma-70, region 3; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	Bacterial transcription activator, effector-binding domain protein.	0.849
AFN45529.1	rpoA	HMPREF9154_1947	HMPREF9154_2225	Sigma-70, region 3; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.914
AFN45529.1	rpoB	HMPREF9154_1947	HMPREF9154_2293	Sigma-70, region 3; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.949
AFN45529.1	rpoC	HMPREF9154_1947	HMPREF9154_2292	Sigma-70, region 3; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.905
AFN45529.1	rpoD	HMPREF9154_1947	HMPREF9154_1946	Sigma-70, region 3; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.564
AFN45529.1	rpoZ	HMPREF9154_1947	HMPREF9154_1619	Sigma-70, region 3; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.895
AFN46336.1	AFN46694.1	HMPREF9154_2263	HMPREF9154_2371	Efflux ABC transporter, permease protein.	Bacterial transcription activator, effector-binding domain protein.	0.526
AFN46694.1	AFN45487.1	HMPREF9154_2371	HMPREF9154_0122	Bacterial transcription activator, effector-binding domain protein.	Transcriptional regulator, TetR family.	0.535
AFN46694.1	AFN45529.1	HMPREF9154_2371	HMPREF9154_1947	Bacterial transcription activator, effector-binding domain protein.	Sigma-70, region 3; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.	0.849
AFN46694.1	AFN46336.1	HMPREF9154_2371	HMPREF9154_2263	Bacterial transcription activator, effector-binding domain protein.	Efflux ABC transporter, permease protein.	0.526
AFN46694.1	AFN47334.1	HMPREF9154_2371	HMPREF9154_2370	Bacterial transcription activator, effector-binding domain protein.	Hypothetical protein.	0.518
AFN46694.1	gph	HMPREF9154_2371	HMPREF9154_2372	Bacterial transcription activator, effector-binding domain protein.	Glycoside/pentoside/hexuronide transporter.	0.550
AFN46694.1	rpoA	HMPREF9154_2371	HMPREF9154_2225	Bacterial transcription activator, effector-binding domain protein.	DNA-directed RNA polymerase, alpha subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.877
AFN46694.1	rpoB	HMPREF9154_2371	HMPREF9154_2293	Bacterial transcription activator, effector-binding domain protein.	DNA-directed RNA polymerase, beta subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.916
AFN46694.1	rpoC	HMPREF9154_2371	HMPREF9154_2292	Bacterial transcription activator, effector-binding domain protein.	DNA-directed RNA polymerase, beta' subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates.	0.876
AFN46694.1	rpoD	HMPREF9154_2371	HMPREF9154_1946	Bacterial transcription activator, effector-binding domain protein.	RNA polymerase sigma factor RpoD; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. This sigma factor is the primary sigma factor during exponential growth.	0.849
AFN46694.1	rpoZ	HMPREF9154_2371	HMPREF9154_1619	Bacterial transcription activator, effector-binding domain protein.	DNA-directed RNA polymerase, omega subunit; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.	0.876
AFN47334.1	AFN46694.1	HMPREF9154_2370	HMPREF9154_2371	Hypothetical protein.	Bacterial transcription activator, effector-binding domain protein.	0.518
gph	AFN46694.1	HMPREF9154_2372	HMPREF9154_2371	Glycoside/pentoside/hexuronide transporter.	Bacterial transcription activator, effector-binding domain protein.	0.550