STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN47364.1Hypothetical protein. (1099 aa)    
Predicted Functional Partners:
AFN47410.1
Hypothetical protein.
 
    0.948
AFN46150.1
Hypothetical protein.
       0.815
AFN45542.1
Hypothetical protein.
 
    0.782
AFN47568.1
Hypothetical protein.
 
    0.776
AFN46565.1
Hypothetical protein.
 
     0.700
AFN46934.1
Hypothetical protein.
 
    0.647
AFN45944.1
SWIM zinc finger domain protein.
 
     0.646
AFN47119.1
WGR domain protein.
 
     0.634
cobJ
precorrin-3B C(17)-methyltransferase.
     
 0.508
AFN46169.1
Hypothetical protein.
  
 
 0.446
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.