STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45522.1Transcriptional regulator, HxlR family. (135 aa)    
Predicted Functional Partners:
AFN45400.1
Hydrolase, alpha/beta domain protein.
 
    0.776
AFN47817.1
Oxidoreductase, zinc-binding dehydrogenase family protein.
 
     0.668
AFN44905.1
Hypothetical protein.
  
    0.645
AFN47627.1
PemK-like protein.
   
    0.552
AFN46831.1
PemK-like protein.
   
    0.434
AFN47586.1
PemK-like protein; Toxic component of a type II toxin-antitoxin (TA) system.
   
    0.434
AFN45484.1
Sigma-70 region 2; Belongs to the sigma-70 factor family.
  
    0.425
AFN45173.1
Transcriptional regulator, TetR family.
  
    0.422
AFN45668.1
FAD binding domain protein.
  
  
 0.411
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.