STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46882.1Histidine kinase. (387 aa)    
Predicted Functional Partners:
AFN46131.1
Response regulator receiver domain protein.
 
   0.955
AFN45933.1
Putative membrane protein.
 
    0.891
AFN46563.1
Hypothetical protein.
 
    0.891
AFN47505.1
ABC transporter, ATP-binding protein.
 
    0.882
AFN46265.1
Histidine kinase.
  
     0.733
AFN45591.1
Response regulator receiver domain protein.
  
   0.695
AFN47174.1
Response regulator receiver domain protein.
  
   0.672
AFN47003.1
Glycosyl hydrolase family 16.
  
     0.670
AFN47002.1
Hypothetical protein.
  
     0.666
AFN47235.1
CRISPR-associated RAMP protein.
  
     0.645
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.