STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN47644.1ABC transporter, ATP-binding protein. (227 aa)    
Predicted Functional Partners:
AFN45695.1
ABC transporter, ATP-binding protein.
 
   
0.925
AFN44975.1
ABC transporter, ATP-binding protein.
 
    
0.849
AFN45973.1
Putative lipoprotein ABC transporter, ATP-binding protein.
 
    
0.801
modB
Molybdate ABC transporter, permease protein; Part of the binding-protein-dependent transport system for molybdenum; probably responsible for the translocation of the substrate across the membrane; Belongs to the binding-protein-dependent transport system permease family. CysTW subfamily.
 
 
    0.760
AFN45643.1
Efflux ABC transporter, permease protein.
  
   0.533
AFN46768.1
Efflux ABC transporter, permease protein.
 
  
 0.532
AFN46618.1
Putative daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
    
0.506
AFN46819.1
FAD dependent oxidoreductase; Belongs to the FAD-dependent glycerol-3-phosphate dehydrogenase family.
       0.504
AFN45104.1
Efflux ABC transporter, permease protein.
  
 
 0.500
AFN46406.1
ABC transporter, ATP-binding protein.
 
    
0.490
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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