STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45156.1Succinate CoA transferase. (503 aa)    
Predicted Functional Partners:
nifJ
Pyruvate synthase.
    
 0.963
pta
Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family.
  
 
 0.945
AFN46812.1
methylmalonyl-CoA mutase.
  
 
 0.935
pycA
Pyruvate carboxylase subunit A.
   
 0.935
AFN47373.1
2-oxoacid:acceptor oxidoreductase, alpha subunit.
    
 0.920
AFN46846.1
E3 binding domain protein.
   
  0.912
AFN46095.1
E3 binding domain protein.
   
  0.912
sucB
2-oxoglutarate dehydrogenase, E2 component, dihydrolipoamide succinyltransferase.
   
  0.912
AFN47784.1
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit.
   
 
 0.911
AFN45075.1
Succinate dehydrogenase/fumarate reductase iron-sulfur subunit.
   
 
 0.911
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.