STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN47627.1PemK-like protein. (191 aa)    
Predicted Functional Partners:
AFN47720.1
Transcriptional regulator, HxlR family.
   
    0.758
AFN45393.1
Dynamin family protein.
  
     0.611
AFN45522.1
Transcriptional regulator, HxlR family.
   
    0.552
AFN46021.1
Dynamin domain protein.
  
   
 0.549
metI
D-methionine transport system permease protein MetI.
       0.517
metN
ABC transporter, ATP-binding protein; Part of the ABC transporter complex MetNIQ involved in methionine import. Responsible for energy coupling to the transport system.
       0.517
AFN46208.1
Hypothetical protein.
  
     0.466
AFN47422.1
Ribbon-helix-helix protein, CopG family.
   
 
 0.438
AFN45059.1
NLPA lipoprotein; Belongs to the nlpA lipoprotein family.
       0.402
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.