STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46656.1Putative membrane protein. (526 aa)    
Predicted Functional Partners:
AFN46785.1
Glycosyltransferase, group 2 family protein.
 
  
 0.877
AFN47633.1
Hypothetical protein.
       0.773
AFN47170.1
MOSC domain protein.
       0.682
fmt
methionyl-tRNA formyltransferase; Attaches a formyl group to the free amino group of methionyl- tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by promoting its recognition by IF2 and preventing the misappropriation of this tRNA by the elongation apparatus; Belongs to the Fmt family.
  
  
 0.518
AFN47463.1
KR domain protein.
  
  
 0.475
pgi
Glucose-6-phosphate isomerase; Belongs to the GPI family.
       0.465
AFN46700.1
Hypothetical protein.
       0.465
AFN45692.1
Putative membrane protein.
  
  
 0.432
AFN47315.1
Hypothetical protein.
       0.421
AFN46757.1
Polysaccharide deacetylase.
  
  
 0.403
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.