STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN47748.1Alpha amylase, catalytic domain protein. (538 aa)    
Predicted Functional Partners:
AFN47628.1
Phosphotransferase enzyme domain protein.
 0.994
malQ
4-alpha-glucanotransferase.
  
 
 0.937
ams
Amylosucrase.
  
  
 
0.925
AFN45166.1
Alpha amylase, catalytic domain protein.
 
  
 
0.923
AFN47155.1
Alpha amylase, catalytic domain protein.
 
  
 
0.922
malL
Oligo-1,6-glucosidase.
  
  
 
0.921
AFN45058.1
Putative alpha-galactosidase.
  
 
 0.920
AFN47306.1
Carbohydrate kinase, PfkB family.
 
  
  0.918
AFN47186.1
Glycosyl hydrolase family 32 N-terminal domain protein.
  
 
 0.912
AFN45796.1
Glycosyl hydrolase family 32 N-terminal domain protein.
  
 
 0.912
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.