STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46925.1Putative lipoprotein. (217 aa)    
Predicted Functional Partners:
AFN47089.1
NADH dehydrogenase subunit M.
    
 
 0.750
AFN47583.1
Hypothetical protein.
   
 
 0.747
AFN47557.1
Transglutaminase-like protein.
       0.437
AFN45997.1
ThiF family protein.
    
 0.432
AFN45456.1
Putative lipoprotein.
   
 
 0.420
AFN47039.1
Peptidase, S8/S53 family; Belongs to the peptidase S8 family.
   
 
 0.420
AFN46695.1
Peptidase, S8/S53 family; Belongs to the peptidase S8 family.
   
 
 0.420
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.