STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46138.1Cadmium, cobalt and zinc/H(+)-K(+) antiporter family protein. (330 aa)    
Predicted Functional Partners:
AFN45896.1
HTH-type transcriptional regulator CmtR family protein.
     
 0.811
AFN46183.1
Cytochrome C biogenesis protein transmembrane region.
    
 0.681
AFN46876.1
Hypothetical protein.
   
    0.587
AFN47343.1
Hypothetical protein.
       0.564
AFN46187.1
Cation diffusion facilitator family transporter; Belongs to the cation diffusion facilitator (CDF) transporter (TC 2.A.4) family.
 
0.548
AFN45906.1
Putative membrane protein.
 
     0.521
AFN47407.1
Cation efflux family protein.
  
 
 0.451
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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