STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN45919.1Hypothetical protein. (227 aa)    
Predicted Functional Partners:
AFN47743.1
Type II secretion system F domain protein.
 
     0.790
AFN47797.1
Hypothetical protein.
 
     0.790
AFN45503.1
SAF domain protein.
 
     0.783
AFN47495.1
Hypothetical protein.
 
     0.780
AFN45428.1
Hypothetical protein.
 
     0.772
AFN46259.1
Hypothetical protein.
  
     0.674
AFN47105.1
LysM domain protein.
  
     0.668
AFN44922.1
Hypothetical protein.
  
     0.546
AFN44990.1
Hypothetical protein.
  
 
  0.545
AFN45608.1
Transcriptional regulator, TetR family.
  
     0.545
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.