STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
lacZBeta-galactosidase. (1038 aa)    
Predicted Functional Partners:
AFN45058.1
Putative alpha-galactosidase.
 
 
 0.969
AFN45751.1
Beta-galactosidase; Belongs to the glycosyl hydrolase 35 family.
 
 0.956
AFN45991.1
Transporter, major facilitator family protein.
 
 
 0.955
AFN46991.1
Aldose 1-epimerase.
  
 
 0.927
AFN44959.1
Putative glucokinase.
    
 0.907
AFN46207.1
PTS family porter, EIIC.
  
  
 0.701
gph
Glycoside/pentoside/hexuronide transporter.
 
 
 0.660
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
 
  
 0.643
AFN46469.1
Hypothetical protein.
       0.572
nifJ
Pyruvate synthase.
     
 0.547
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.