STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AFN46575.1AMP-binding enzyme. (531 aa)    
Predicted Functional Partners:
AFN46007.1
Nonribosomal peptide synthase.
 
 0.918
AFN47463.1
KR domain protein.
  
 0.860
AFN45546.1
Nonribosomal peptide synthase.
 
 0.820
AFN47624.1
Beta-ketoacyl synthase, N-terminal domain protein.
 
 0.800
AFN47078.1
AMP-binding enzyme.
     0.761
AFN47683.1
malonyl-CoA synthase family protein.
  
     0.727
AFN46844.1
Thioesterase domain protein.
  
  
 0.702
AFN45090.1
AMP-binding enzyme.
  
 0.667
AFN45073.1
Unspecific monooxygenase domain protein; Belongs to the cytochrome P450 family.
  
 0.623
rplF
Ribosomal protein L6; This protein binds to the 23S rRNA, and is important in its secondary structure. It is located near the subunit interface in the base of the L7/L12 stalk, and near the tRNA binding site of the peptidyltransferase center; Belongs to the universal ribosomal protein uL6 family.
    
  0.614
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.