Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
AFN45977.1ABC transporter, permease protein, DrrB family. (265 aa)    
Predicted Functional Partners:
AFN45162.1
ABC transporter, permease protein, DrrB family.
 
  
  0.958
AFN46414.1
Putative nodulation ATP-binding protein I.
 
     0.946
drrA
Daunorubicin/doxorubicin resistance ATP-binding protein DrrA.
 
     0.774
AFN47386.1
ABC-2 type transporter.
 
  
  0.691
AFN46406.1
ABC transporter, ATP-binding protein.
 
     0.579
AFN47245.1
Hypothetical protein.
       0.569
AFN44970.1
ABC transporter, permease protein, DrrB family.
 
  
 
0.565
AFN47463.1
KR domain protein.
     
 0.533
AFN47816.1
ABC transporter, ATP-binding domain protein.
 
     0.501
AFN47066.1
ABC transporter, ATP-binding protein.
 
     0.496
Your Current Organism:
Pseudopropionibacterium propionicum
NCBI taxonomy Id: 767029
Other names: P. propionicum F0230a, Propionibacterium propionicum F0230a, Pseudopropionibacterium propionicum F0230a
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